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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25012633
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEHQVAVTVL SNLLNIHTEL KKKKIGAMQF FLALTLILAY SLDTANGSCE GSLDLENGRF  60
   61 FTRSNNLVIF QCNRGFVLQG NSIHTCDRDG RLREKKPFCA RKGCDKPEDP TNGYVLDNPV 120
  121 KAEIVCLDGF VLYGSRTAFC DGEKWSTQLG ACRRSNHTMD HSCDFESEDQ CGWSAEETIW 180
  181 LPWKRISAVT DFHHPRTGPR YDHTFGNTSG GHYMRMETQI EAYGSYHFVS PVYPRSLCLN 240
  241 VACCFRFHYF MFGAGVDRLV LSVKPASLQI DDMWNSFRSN SSKFEITGSQ GTHWLENTIT 300
  301 IDKMHEDFQV VFTATDARSQ FGDIAIDDVK LMTGSECGVD GYSTTTTTES ASSAMSSSEE 360
  361 PLVFDMMSCT FRCGSISPGS PLFSDEGIVM SCGCDDSCIL NNNCCPNYFE KCVKELDIGS 420
  421 NVFLNSANTT TTSISRNTTT EKVFSISLEA SRSFTTPRTS TNSTTFPRTQ ISTKKLLNTH 480
  481 ETLTETSTIP TRNKKLSQPS IFSSQHITVT TTTDRSRKDY HEDIAGQLDM NTNIPHPALI 540
  541 VMYLLIGVIL VVVVANLKQL CKILSKNSSR DNEKVVSFKK AFEGLRKPRR LSQNCNGMDQ 600
  601 HLCSAFDEDL DYFEDMDMNI RMVTDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle