YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25012502
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKILISALL CVAMFGSMAL GSPECPTPNG RFASGDQCDS YTECQDGTPV EKLCPDGLLF  60
   61 HQRTKATGEC TYAPYSTCKE RARLQPANGT EECPRQFGFY PNGDATKCGV YRNCAHGVAS 120
  121 LTKCPEGLAF NEETYQCDWP DLVESCNAEA YLGFNCPAAD SADDSAAAAV DVSPEGELSY 180
  181 YRHPQTCKKY FVCVNGHPRL YNCGKYLAFN SQTKLCDFYN KVPECYALLK EKQRLKAEKQ 240
  241 QPQVAQPED

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	249	0.99