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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25012451
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQHNYTNPA FCQNSEYYPV PSGNSSRVES IYNRSLQMNF GAAPPRATRD PREGPLRMQR  60
   61 SMSTRSVTRK QHQQQQQQQH QQQIHQQHLA QQQQHQPQSS SGRYALVPLE ELNSSRASRY 120
  121 AIVPGQAAQR LARSQDNLDR YGSRHGLHEE EEPHSFHEEP HQETQFASLP PILNLPPKPR 180
  181 NINNNTNANQ TQIKHAFSSD FGSKTFLIVD KNSNQRYQMV PTAEDEELVD ENQEIIQMHN 240
  241 GRAHRYAVVP TDADDDDLAE EQEQQETCLS NMELSRQYAA RTSTPQQKDA AAATRALHEL 300
  301 LTTPRKMQPP PRLAHSTPRN AAHHEQLQLE RRLEIYKSQQ IYQSQQVGAV VGVPPTLPLR 360
  361 QNRLSPQRLH YETVKPLPMQ IADRSMAVIS PRVQEQGQEQ EREQDMSSIQ GKGKKNSSYP 420
  421 QKMANATITL AVVSLMLVLG STMNAGLIIY MIAHLGKSFY LQFSLVASFS GMGLGFLGFK 480
  481 SRHCEWLPNR SYSSGYILVT VFCLFKSCGL LVILVVDPFP GFPVHDVTTG VILGLSTFTM 540
  541 FFIGLGVLGS LWCHRPPPDN RVNVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle