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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25012361
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSYLTALRAF ESLTIFTGGC CLTFPAHRST ITFLVIARAQ ESWLVHRTAA SPCYRQKQFN  60
   61 NCKADCSSLS TTPNPKTDLV NMNGPKHKFC TKLSSTYLRK WWITIVVAAA LIIGGIVVAC 120
  121 EFTVLIDAVV DRMVALRPGA KTFGWWAKPP VEPRISLYIY NVTNADDFLS NGSKAIVDEV 180
  181 GPYVYSETWE KVNIVENDNG TLSYNLRKIY SFREDLSVGP EDDVVIVPNI PMLSATSQSK 240
  241 HAARFLRLAM ASIMDILKIK PFVQVSVGQL LWGYEDPLLK LAKDVVPKEQ KLPYEEFGLL 300
  301 YGKNGTSSDR VTVNTGVDDI RRYGIIDNFN GRTHLPHWTT DACNTLAGTD GSIFPPHIDH 360
  361 DRILHVYDKD LCRLLPLVFE KEVMTSNEVP GYRFTPPEWV FADVDSHPDN MCFCPAGKPS 420
  421 CSPNGLFNVS LCQYDSPIML SFPHFYLADE SLRTQVEGIS PPMKEKHQFF FDVQPKMGTT 480
  481 LRVRARIQIN LAVSQVFDIK QVANFPDIIF PILWFEEGID NLPDEVTDLM RFAEQVPPKI 540
  541 RVALIVGLCA LGVILLLLST FCLIRNSHQQ STLHLEGSNY LATAQVDMNK KQNKDNQPAR 600
  601 Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle