YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25012356
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFSFVQNREV KTSREMQVPL SDVQVLQDPT DAETLVGGDK EETFAHMKEW KRQYMRGISH  60
   61 TPSQAGVYYE ALKGSSHSLA KGSRNFRPGS MRRVRRRAVF KNGDCNVVQK HLQRRRVRFL 120
  121 QDMYTTMVDW QWRWTLLAFA LSFILSWLFF ALIWWLIIYT HGDLEEPHLP ENQEESGWAP 180
  181 CVSAIDGFTS CFLFSIETQH TIGYGVRTTS PECPEAIFMM CFQSIYGLMS SAFMAGIVFA 240
  241 KMTRAKQRAQ TLLFSKHAVI CQRDGTLSLM FRVGDMRKSH IIGAGVRAQL IRTKSTKEGE 300
  301 VMTQYFTELE IGTDDSGSDL FFIWPMVIEH KIDENSPLYN LNATDMLQDK FEIVVILEGT 360
  361 VESTGQSTQA RSSYINTEIL WGHRFDPVVL YNKDLQAYEI DYARFNETTQ VDTPLCSARE 420
  421 LNEIYKIQEG FRTPETTFTM RQLSHNHSDQ AS

Type	Start	End	Confidence
Cytoplasmic	1	134	0.96
Transmembrane Helix	135	158	0.91
Non-Cytoplasmic	159	218	0.82
Transmembrane Helix	219	240	0.87
Cytoplasmic	241	452	0.78