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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25009688
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSLKRIHVEA SAVTEHYYRL DSRRNRMMEH SFALNKANKY MVSDMGSELL YSESTVIGLV  60
   61 QDATTTSGAY PAHLNYMIGC IRADKFYSFE LLLYRLCSFN LIIRFSEMPS PVYEYHYGYK 120
  121 PERVRKFAIL MMASSTMIWP KVLKICAHYH VNIYDCPSSA SQREDKVKEL SQEIVNVEKV 180
  181 LKEAELMRRQ ILEVAGRDLF IIRVNLRKAL KVYDLMNRLR LVGGVEVPRY LLAEVYIPSS 240
  241 DVPEVEVILR NASRISGGAD NIDSSDEDEM NDMKTMPNTT PYPIEADFQP LEDMSAGAIL 300
  301 LKKNRLVNHM PPTYFRLNKF TRGFQNLIDA YGMADYKELN PAPYTIITFP FLFAVMFGDL 360
  361 GHGILLILFS SLMIWKHREI EKYQINATSE NEILNILYAG RYIILLMGVF SVYMGLVYNI 420
  421 VMAKGFNLFG SSWSCRYNET TVYDPAFHVT LDSSHPHFYS GHPYPLGMDP VWAVCGQDSI 480
  481 TTTNSLKMKM AIVLGISQMM FGLGLAAANC VLMNRKADLI LVVIPQMIFM LCLFGYLVFL 540
  541 IFYKWMSYGG HKPAPYNAAC APSVLITFIN MMLMKKEDPV ENCLDYMYPN ERMIEFALVG 600
  601 IAFCTIPILL AGKPIYLMRR RRKMQQERER DFKRMRRQTI AEMRSTMRYT DDDNSETSRQ 660
  661 KSVDNEEEHE MSEIWIHSGI HTIETVLGSV SHTASYLRLW ALSLAHDQLS DVLWHMVLTK 720
  721 GFANTLPLYY GVPVLMATFF AWAILTVAIL VMMEGLSAFL HTLRLHWVEF QSKFFGGAGE 780
  781 SFKAFNFPTS NQRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle