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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22003413
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESTTFDLP IAGMTCASCA GRVERALRKV SGASAVSVNL ATEQARVQAP GDRLPALMQA  60
   61 VERAGYSVPR QTVELSIDGM TCASCVGRVE RALSKVPGVS SVSVNLANER AHIELLGQVD 120
  121 TQTLLDAVSK AGYSASVWQA ERPQSDDQQK RLHRERWALI CAIALALPLV LPMLLQPFGI 180
  181 HWMLPAWAQF ALATPVQFIF GARFYVAAWK AVRAGAGNMD LLVALGTSAG YGLSVYEWAS 240
  241 AAGRMPHLYF EASAVVIALV LLGKYLESRA KRQTASAIRA LEALRPERAI QVIDGREQDV 300
  301 AISALRLDDL VLVKPGERFP VDGEVVEGQS HADEALISGE SLPVPKQPGD KVTGGAINGE 360
  361 GRLLVRTQAL GAETVLARII RLVEDAQAAK APIQKLVDKV SQIFVPTVLL IALATLIGWW 420
  421 LYGAPLETAV INAVAVLVIA CPCALGLATP TAIMAGTGVA ARHGILIKDA EALERAHEVS 480
  481 SVVFDKTGTL TSGTPRIAHF SAVDGDENNL LTLAGALQRG SEHPLAKAVL DAAAERGLNV 540
  541 PDVSDSQALT GRGIAGTLDG RRLALGNRRM LDESALSTGE LSASAEAWER EGRTLSWLIE 600
  601 QSPQPKVLGL FAFGDTLKPG ALQAVQQLAA RDIQSHLLTG DNSGSARVVA EALGIQNVHA 660
  661 EVLPADKAAT VAELKKTSVV AMVGDGINDA PALAAADIGI AMGGGTDVAM HAAGITLMRG 720
  721 DPRLVPAALE ISRKTYAKIR QNLFWAFVYN LIGIPLAVFG FLNPVLAGAA MALSSVSVVS 780
  781 NALLLKTWKP KDLEEHR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle