YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3205213
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQLLSWSCK TLLLLPLIGI CFTKFTKTNG VRSEIHIFHH SCALKKDEGP CKALKDRFYF  60
   61 DTDTGRCESF EYGGCQGNEN NFETLQECEK MCLVKEDKSP CQLDDEPGPC RGLVPRYFFD 120
  121 FKSQECKRFF YGGCFGNANN FKTIKECHER CLPALNNMER NAPLKPEEEE AKPKTEPLAK 180
  181 HVEAPLNASH LPMQRMSKPS AKKPRLNRPK LCFSPIDRGN CEGSEGRYMY NPRTKRCQMF 240
  241 HYSGCGGNKN NFVKRGDCIK MCMRDLRRKL IRLKLRNSKV VFRSVKP

Type	Start	End	Confidence
Signal Peptide	1	23	0.94
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	287	0.99