YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2852623
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FYNGWILFLA VLAIPVCAVR GRNVENMKIL RLMLLHIKYL YGIRVEVRGA HHFPPSQPYV  60
   61 VVSNHQSSLD LLGMMEVLPG RCVPIAKREL LWAGSAGLAC WLAGVIFIDR KRTGDAISVM 120
  121 SEVAQTLLTQ DVRVWVFPEG TRNHNGSMLP FKRGAFHLAV QAQVPIVPIV MSSYQDFYCK 180
  181 KERRFTSGQC QVRVLPPVPT EGLTPDDVPA LADRVRHSML TVFREISTDG RGGGDYLKKP 240
  241 GGGG

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.88
Transmembrane Helix	5	24	0.83
Cytoplasmic	25	89	0.91
Transmembrane Helix	90	108	0.77
Non-Cytoplasmic	109	244	0.64