YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3184552
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRNPGPSGL RPRDFNSIIQ TCSGNIQRIS QATAQIKNLM SQLGTKQDSS KLQENLQQFQ  60
   61 HSTNQLAKET NELLKELGSL PLPLSASEQR QQKLQKERLM NDFSSALNNF QVVQRKVSEK 120
  121 EKESIARARA GSRLSAEDRQ REEQLVSFDS HEEWNQMQSQ EEEAAITEQD LELIKERETA 180
  181 IQQLEADILD VNQIFKDLAM MIHDQGDLID SIEANVESSE VHVERASDQL QRAAYYQKKS 240
  241 RKKMCILVLV LSVIVTVLVV VIWVASK

Type	Start	End	Confidence
Cytoplasmic	1	244	0.97
Transmembrane Helix	245	265	0.96
Non-Cytoplasmic	266	267	0.80