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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VM3AD_AGKCL
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQVLLVTLC LAVFPYQGSS IILESGNVND YEVVYPRKVT VLPKGAVQPK YEDAMQYEFK  60
   61 VNGEPVVLHL EKNKQLFSKD YSETHYSPDG REITTYPLVE DHCYYHGRIE NDADSTASIS 120
  121 ACNGLKGHFK LQGEMYLIDP LKLPDSEAHA VFKYENVEKE DEAPKMCGVT QNWESYEPIK 180
  181 KASQLNLTPE QQAYLDAKKY VEFVVVLDHG MYTKYKDNLD KIKTRIFEIV NTMNEMFIPL 240
  241 NIRVALICLE IWSDKDKFNM TSAANVTSIS FRNWRATDLL KRKSHDNAQL LTVIDFDGPT 300
  301 IGKAYMASMC DPKRSVGIIQ DHSTINLMMA VTMAHEMGHN LGMDHDEKYC TCGAKSCVMA 360
  361 KALSRQPSKL FSNCSQEDYR KYLIKRRPKC ILNEPNGTDI VSPPVCGNEL LEVGEECDCG 420
  421 SPTNCQNPCC DAATCKLTPG SQCADGVCCD QCRFTRAGTE CRQAKDDCDM ADLCTGQSAE 480
  481 CPTDRFQRNG HPCLNDNGYC YNRTCPTLKN QCIYFFGPNA AVAKDSCFKG NQKSNNHTYC 540
  541 RKENGKKIPC APQDIKCGRL YCFRNLPGKK NICSVIYTPT DEDIGMVLPG TKCEDGKVCS 600
  601 NGHCVDVNIA YKSTTGFSQI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle