YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2353169
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFNNRLEAIL SKAYVYRVIR TTAYLLYSLH LNSCLYYWAS AFQGIGSTHW VYDGVGNSYI  60
   61 RCYYWAVKTL ITIGGLPDPQ TLFEIVFQLL NYFTGVFAFS VMIGQMRDVV GAATAGQTYY 120
  121 RSCMDSTVKY MNFYKIPRSV QNRVKTW

Type	Start	End	Confidence
Cytoplasmic	1	20	0.86
Transmembrane Helix	21	40	0.80
Non-Cytoplasmic	41	84	0.87
Transmembrane Helix	85	104	0.79
Cytoplasmic	105	147	0.82