YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3139062
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQDFGKFLGM FLLVLFSFTI GLTQLYDKGY TSKEQKDCVG IFCEQQSNDT FHSFIGTCFA  60
   61 LFWYIFSLAH VAIFVTRFSY GEELQSFVGA VIVGTYNVVV VIVLTKLLVA MLHKSFQLIA 120
  121 NHE

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.60
Transmembrane Helix	7	26	0.89
Cytoplasmic	27	50	0.66
Transmembrane Helix	51	74	0.81
Non-Cytoplasmic	75	86	0.55
Transmembrane Helix	87	110	0.89
Cytoplasmic	111	123	0.68