YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|288135
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIALMFLLA LYQMQSAIHS EIIDTPNYAG NSLQDADSQV SPSQDNDLVD ALLGNDQTER  60
   61 AELEFRHPIS VIGIDYSKNA VVLHFQKHGR KPRYKYDPEL EAKRRSVQDN FMHFGKRQAE 120
  121 QLPPEGSYAG SDELEGMAKR AAMDRYGRDP KQDFMRFGRD PKQDFMRFGR DPKQDFMRFG 180
  181 RDPKQDFMRF GRDPKQDFMR FGRTPAADFM RFGRTPAEDF MRFGRSDNFM RFGRSPHEDV 240
  241 RSPKQDFMRF GRPDNFMRFG RSRPQDFVRS GKMDSNFIRF GKSLKPAAPE SKPVKSNQGN 300
  301 PGERSPVDKA MTELFKKQEL QDQQVKNGAQ ATTTQDGSVE QDQFFGQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.90
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	347	0.99