YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12711645
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFLRSIATT AIATIPAALA FSSSSSSSFP RSSQSPNPQN RLGLVKTLAT PPSALHMDHK  60
   61 LSSQPDAVLP ELLTEFMVDM KCEGCVNAVK NKLNEINGVK NVEVDLSNQV VRILGSTPVK 120
  121 TMTEALEQTG RKARLIGQGV PEDFLISAAV SEFKGPDIFG VVRLAQVNME LARIEANFSG 180
  181 LSPGKHGWSI NEFGDLTRGA ASTGKMFNPV NEENSKEPLG DLGTLEANEK GEAFYSGVKE 240
  241 KLRVADLIGR SVVVYATEDK SEHGITAAVI ARSAGVGENY KKLCTCDGTT IWEATDTDFV 300
  301 TSKV

Type	Start	End	Confidence
Signal Peptide	1	27	0.94
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	304	0.99