YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44890123
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGTAYKVRV GAEGDSGFVS SEDVFETGPA MASRQVDIAT QGWFIGLMCA VALLILILLI  60
   61 VCFIRRNKGG KYPVKEKEDA HADPEIQPMK EDDGTFGEYS DAEDHKPLKK GSRTPSDRTV 120
  121 KKEDSDDSLV DYGEGVNGQF NEDGSFIGQY SGKKEKEPAE GNESSEAPSP VNAMNSFV

Type	Start	End	Confidence
Non-Cytoplasmic	1	41	0.86
Transmembrane Helix	42	64	0.92
Cytoplasmic	65	178	0.89