YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|950299
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASYTWIRTL GLLLMVSATM GAAPKKPVDV PFGRNYVPTW AFDHIKYFNG GSEIQLHLDK  60
   61 YTGTGFQSKG SYLFGHFSMQ IKMVPGDSAG TVTAFYLSSQ NSEHDEIDFE FLGNRTGQPY 120
  121 ILQTNVFTGG KGDREQRIYL WFDPTKDYHS YSVLWNLYLI VFFVDDIPIR VFKNSKDLGV 180
  181 KFPFDQPMKI YSSLWNADDW ATRGGLEKTD WSKAPFVAAY KSFHIDGCEA SVEAKFCATQ 240
  241 GKRWWDQNDY RDLDAFQYRR LRWVRSKYTI YNYCTDRTRY PTMPPECRRD RDV

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	293	0.99