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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44921727
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALELVGGAL LSAFLQVAFE KLASPQVLDF FRGRKLDQKL LNNLETKLNS IQALADDAEL  60
   61 KQFRDERVRD WLLKVKDAVF DAEDLLDEIQ HEISKCQVEA ESQTCSGCTC KVPNFFKSSP 120
  121 VSSFNREIKS RMEQVLEDLE NLASQSGYLG LKNASGVGSG GAVSQQSQST SLLVESVIYG 180
  181 RDDDKEMIFN WLTSDIDNCN KLSILPIVGM GGLGKTTLAQ HVFNDPRIEN KFDIKAWVCV 240
  241 SDEFDVFNVT RTILEAVTKS TDDSRNREMV QGRLREKLTG KRFFLVLDDV WNRNQKEWKD 300
  301 LQTPLNDGAS GSKIVITTRD KKVASVVGSN KTHCLELLQD DHCWRLFTKH AFRDDSHQPN 360
  361 PDFKEIGTKI VEKCKGLPLA LTTIGSLLHQ KSSISEWEGI LKSEIWEFSE EDSSIIPALA 420
  421 LSYHHLPSRL KRCFAYCALF PKDYRFEKEG LIQLWMAENF LQCPQQSRSP EEVGEPYFND 480
  481 LLSRSFFQQS STIERTPFVM HDLLNDLAKY VCRDICFRLE DDQAKNIPKT TRHFSVASDH 540
  541 VKWFDGFGTL YNAERLRTFM SLSEEMSFRN YNRWHCKMST RELFSKFKFL RILSLSGYSN 600
  601 LTELPDSVGN LKYLHSLDLS NTDIEKLPES TCSLYNLQIL KLNGCRHLKE LPSNLHKLTD 660
  661 LHRLELIDTG VRKVPAHLGK LKYLQVLMSS FNVGKSREFS IQQLGELNLH GSLSIENLQN 720
  721 VENPSDALAV DLKNKTHLVE LELKWDSDWN QNRERDEIVI ENLQPSKHLE KLTMRNYGGK 780
  781 QFPSWLSDNS SCNVVSLTLE NCQSCQRLPP LGLLPFLKEL SIRWLDGIVS INADFFGSSS 840
  841 CSFTSLESLE FSDMKEWEEW ECKGVTGAFP RLQRLFIVRC PKLKGLPPLG LLPFLKELLI 900
  901 ERLDGIVSIN ADFFGSSSCS FTSLESLKFF DMKEWEEWEC KGVTGAFPRL QHLSIVRCPK 960
  961 LKGLPPLGLL PFLKELSIDS LDGIVSINAD FFGSSSCLFT SLESLKFSRM KEWEEWECKG1020
 1021 VTGDFPRLQR LSIYYCPKLK GLPPLGLLPF LKELSIDNLD GIVSINADFF GSSSCSFTSL1080
 1081 ESLKFSDMKG WEEWECKGVT GAFPRLQRLS IYYCPKLKGL PPLGLLPFLK ELSIDNLDGI1140
 1141 VSINADFFGS SSCSFTSLES LKFSDMKEWE EWECKGVTGA FPRLQRLSIY RCPKLKGHLP1200
 1201 EQLCHLNDLT ISGCDSLTTI PLDIFPILRE LDIRKCPNLQ RISQGHTHNH LQRLSIKECP1260
 1261 Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle