YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44921725
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALELVGGAL LSAFLQVAFE KLASPQVLDF FRGRKLDEKL LNNLEIKLNS IQALADDAEL  60
   61 KQFRDPPVRN WLLKVKDALF DAEDLLDEIQ HEISKCQVEA EAEAESQTCT CKVPNFFKSS 120
  121 PVGSFNKEIK SRMEQVLEDL ENLASQSGYL GLQNASGVGS GFGGAVSLHS ESTSLVVESV 180
  181 IYGRDDDKEM IFNWLTSDID NCNKLSILSI VGMGGLGKTT LAQHVFNDPR IENKFDIKAW 240
  241 VCVSDEFDVF NVTRTILEAV TKSTDDSRNR ETVQGRLREK LTGNKFFLVL DDVWNRNQKE 300
  301 WKDLQTPLNY GASGSKIVVT TRDKKVASIV GSNKTHCLEL LQDDHCWRLF TKHAFRDDSH 360
  361 QPNPDFKEIG TKIVEKCKGL PLALTTIGSL LHQKSSISEW EGILKSEIWE FSEEDSSIVP 420
  421 ALALSYHHLP SHLKRCFAYC ALFPKDYRFD KEGLIQLWMA ENFLQCHQQS RSPEKVGEQY 480
  481 FNDLLSRSLF QQSSTVERTP FVMHDLLNDL AKYVCGDICF RLENDQATNI PKTTRHFSVA 540
  541 SDHVTCFDGF RTLYNAERLR TFMSLSEEMS FRNYNPWYCK MSTRELFSKF KFLRVLSLSG 600
  601 YYNLTKVPNS VGNLKYLSSL DLSHTEIVKL PESICSLYNL QILKLNGCEH LKELPSNLHK 660
  661 LTDLHRLELI DTEVRKVPAH LGKLKYLQVL MSSFNVGKSR EFSIQQLGEL NLHGSLSIRQ 720
  721 LQNVENPSDA LAVDLKNKTH LVELELEWDS DWNPDDSTKE RDVIENLQPS KHLEKLTMSN 780
  781 YGGKQFPRWL FNNSLLRVVS LTLKNCKGFL CLPPLGRLPS LKELSIEGLD GIVSINADFF 840
  841 GSSSCSFTSL ESLEFSDMKE WEEWECKGVT GAFPRLQRLS IMRCPKLKGH LPEQLCHLNY 900
  901 LKISGWDSLT TIPLDIFPIL KELQIWECPN LQRISQGQAL NHLETLSMRE CPQLESLPEG 960
  961 MHVLLPSLDS LWIDDCPKVE MFPEGGLPSN LKSMGLYGGS YKLISLLKSA LGGNHSLERL1020
 1021 VIGGVDVECL PDEGVLPHSL VNLWIRECGD LKRLDYKGLC HLSSLKTLTL WDCPRLQCLP1080
 1081 EEGLPKSIST LGILNCPLLK QRCREPEGED WPKIAHIKRV WLLGNDVDV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle