YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45027574
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKLKTVFV LYFMVSLFGL LYALMQLGQR CDCRDHEQSK DQQISQLKGE LQKLQEHIKT  60
   61 SELSKKTDVP RIYVITPTYA RLVQKAELTR LSHTFLHVPQ LHWIVVEDAP QQTQLVSDFL 120
  121 SASGLTYTHL NKLTPKERKL QEGDPNWLKP RGAEQRNEGL RWLRWMGSTV HGKEAAALEE 180
  181 AVVYFADDDN TYSLQLFEEM RYTYRVSVWP VGLVGGMKFE RPVVEDGKVV RFHTGWPSNR 240
  241 PFPIDMAGFA VSLRLVLTNK KALFDGDAQM GFLESSFLSA PWSLWDDLEP KADLCTKVLV 300
  301 WHTRTEKPKM KREEALLKQG MGSDPDVEV

Type	Start	End	Confidence
Signal Peptide	1	23	0.78
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	329	0.99