YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4878002
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGDVEFVCKV YSDAQPHIQW IKHVEKNGSK YGPDGLPYLK VLKHSGINSS NAEVLALFNV  60
   61 TEMDAGEYIC KVSNYIGQAN QSAWLTVLPK QQAPVREKEI TASPDYLEIA IYCIGVFLIA 120
  121 CMVVTVIFCR MKTTTKKPDF SSQPAVHKLT KR

Type	Start	End	Confidence
Non-Cytoplasmic	1	108	0.77
Transmembrane Helix	109	129	0.91
Cytoplasmic	130	152	0.71