YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2853603
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRRHTEEH ENHERWLVSY ADFITLLFAF FVVMYSISSI NEGKYKVISQ ALLGVFNDPE  60
   61 RSMKPIPIGD EQPLSVRPAE PLVKDSEQTE AGLAATNVDP LKTISDDVRD AFGDLINSNQ 120
  121 MTVRGNELWI EIELSSSLLF GSGDAMPSDK AFAIIDKVAS ILKPFANPVH VEGFTDNLPI 180
  181 RTAQYPTNWE LSSARAASIV RLLAMEGVNP ARMASVGYGE YQPVAGNDTA EGRARNRRVV 240
  241 LVISRNLEVR RSLTGSGSAH ATPDAALRRA GTQSAPATPA TVAGQ

Type	Start	End	Confidence
Cytoplasmic	1	15	0.97
Transmembrane Helix	16	37	0.90
Non-Cytoplasmic	38	285	0.99