YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2984394
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVTRHIYN REEYVRFDSD LGEYRALTEL GRPSAEYWNK QYLEQTRAEL DRVCRYNYEG  60
   61 PAALTSLRRL EQPNVAISLS RTEALNHHNL LVCSVTDFYP AQIKVRWFRN GQEETTGVVS 120
  121 TQLIRNGDWT FQILVMLEMT PQRGDVYTCH VDHPSLESPV TVEWRAQSES AQSKMLSGIG 180
  181 GFVLGVIFLG LGLFIHHKSQ KGPRGP

Type	Start	End	Confidence
Non-Cytoplasmic	1	174	0.58
Transmembrane Helix	175	196	0.93
Cytoplasmic	197	206	0.55