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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1079139, gi|4...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSALRLIFL GALLGASVCA SPIEFVMDTS LNGSRSDPAT ATHPGKWPPT TKAPALRAPA  60
   61 GTAGHAYQSP SSSLAADNRS HDNNNASAVS MLLPQDGDAS GAVAPAVTPQ LPIYIAQPSA 120
  121 KKPENKIKCH CDTCKESNNI CETDGFCFTS VEKNSDGSII FSYSCMVVKY NMQRSKPSEC 180
  181 LTSNERFDTY RIDCCKSDFC NKNENMKRIF ETDYVPHRLT SWEFVAIILG ATLFICFTGT 240
  241 STWYYCQRRK RMASGRTFAK EDSAYDPILN GNTTIHDIIE MTTSGSGSAG LPLLVQRSIA 300
  301 RQVQLCHVIG KGRFGEVWRG RWRGENVAVK IFSSREECSW FREAEIYQTV MLRHENILGF 360
  361 IAADNKDNGT WTQLWLVTDY HENGSLFDYL TTHPVDTNTM LNMSLSIATG LAHLHMDIVG 420
  421 TRGKPAIAHR DLKSKNILVK SNLSCAIGDL GLAVRHVEKN DSVDIPSTHR VGTKRYMAPE 480
  481 VLDESMNDQH FDSYKRADVY AFGLILWEIA RRCNMGMIYD EYQLPYYDVV QPDPSIEEMK 540
  541 KVVCIEKCRP NIPNRWHASD VLHNMAKVMK ECWYPNPVAR LTALRIKKTL ASISVEDKVK 600
  601 N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle