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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|523340, gi|21...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESNIYLVFL LTFLLYNNAR AEISDHLRED IPDLDMELSS ASSAHLNGKE LPAVPQNSVQ  60
   61 THPRYKCYSC EPPCRDPYEF THTCQNAIQC WKSRTRHADG QVQESRGCST SPDQLPMICS 120
  121 QNSLKINGPS KRNTGKFVNV VCCAGDYCNE GDFPELLPFD SNDVTVITAD TSSISKMLVA 180
  181 VLGPFLVIAL LGAVTIFFIR RSHRKRLAAS RTKQDPEAYL VNDELLRATS AGDSTLREYL 240
  241 QHSVTSGSGS GLPLLVQRTL AKQVTLIECI GRGKYGEVWR GHWHGESIAV KIFFSRDEES 300
  301 WKRETEIYST ILLRHENILG FIGSDMTSRN SCTQLWLMTH YYPLGSLFDH LNRNALSHND 360
  361 MVWICLSIAN GLVHLHTEIF GKQGKPAMAH RDLKSKNILV TSNGSCVIAD FGLAVTHSHV 420
  421 TGQLDLGNNP KVGTKRYMAP EVLDESIDLE CFEALRRTDI YAFGLVLWEV CRRTISCGIA 480
  481 EEYKVPFYDV VPMDPSFEDM RKVVCIDNYR PSIPNRWSSD SLMTGMSKLM KECWHQNPDV 540
  541 RLPALRIKKT IHKLASADEK IRLDFDEVCV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle