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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33991769
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CLSVIMLAAL LKLDLSSVGL SLFLGLIFLV LFEIFRIHSC KGRFPPGPTP LPFVGSIPHF  60
   61 LNNPMGFIKS LSQYGEMTTV YPGRKPAIIL NTLQLMKEAL VQNGSSFSGR PPVPVFNWVT 120
  121 DGYGIVMATF GHSWRQQRRF ALHTLRNFGL GKKSVEERVT EESGYLISEF LKAEGKPFNP 180
  181 QHAIHNAAAN IICSIVFGDR FDYDNKSFTY LLEIIKENII QAGSLVGQVF NLVPIIKHVP 240
  241 GPHQKIYQNG QAFKSFIRES VKEHRQTLDP DSPRDFIDAY LLEMEKQKST QDSTFHEDNM 300
  301 VMAVGDLFLA GSDTTATTIR WGLIYLTQNP DVQERCHEEI VRVLGFDRLP SMDDRDRLPY 360
  361 TYATVHEFQR CANLVPTGVP HETTQATKLR GYDIPQGTQI LINLTEILTN KEHWKHPDTF 420
  421 NPENFLDDKG HFFKPEAFLP FSLGPRACLG ETLAKAELFL FVTSLLQRIR FSWPTGEKLP 480
  481 DMNGIFGIVR SPKPFNIICH SRGSKH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle