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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12655802
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGSLRIKYA NVFFRGDGVQ MFKRITIVGL SVVMFLPSIY GGSKAYADTV NNGTLMQYFE  60
   61 WYAPNDGNHW NRLRTDAENL AQKGITSVWI PPAYKGTTQN DVGYGAYDLY DLGEFNQKGT 120
  121 VRTKYGTKAQ LKSAIDALHK KNIDVYGDVV MNHKGGADYT ETVTAVEVDP SNRNVEVSGD 180
  181 YEISAWTGFN FPGRGDSYSN FKWKWYHFDG TDWDEGRKLN RIYKFRGIGK AWDWEVSSEN 240
  241 GNYDYLMYAD LDFDHPDVAN EMKKWGTWYA NELNLDGFRL DAVKHIDHEY LRDWVNHVRQ 300
  301 QTGKEMFAVA EYWQNDIQTL NNYLAKVNYN QSVFDAPLHY NFHYASKGNG NYDMRNILKG 360
  361 TVVANHPTLA VTLVENHDSQ PGQSLESVVS PWFKPLAYAF ILTRAEGYPS VFYGDYYGTK 420
  421 GNSNYEIPAL KDKIDPILTA RKNYAYGTQR DYFDHPDVIG WTREGDSVHA NSGLATLISD 480
  481 GPGGAKWMDV GKNNAGEIWY DITGNQTNTV TINKDGWGQF QVSGGSVSIY VQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle