YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1389955
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLLLFSGALF LTQTRAGSHS LRYFHTAVSR PAAGSPVHHR GLRGRHAVRA VRQRRRDSEK  60
   61 GAAGAVGGAG GAGVLGPGDA DLQGQRADLP SEPANLRGYY NQSEAGSHTV QRMYGCDLGP 120
  121 DGRLLRGYYQ DAYDGKDYIA LNEDLRSWTA ADTXAQITQR KWEAANEAER TRAYLEGTCL 180
  181 EGLRRYLENG KETLQRAEPP KTHVTRHPIS DHEATLRCWA LGFYPAEITL TWHRDGEDQT 240
  241 QDMELVQTRP AGDGNFQKWA AVVVPSGEEQ RYTCHVQHEG LPEPLTLRWE PSSQPTIPIV 300
  301 GIVAGLVVLG AVVTGAVFAA VMWRKKSSDK KGGSYSQAAN SDSAQGSDVS LTACKV

Type	Start	End	Confidence
Non-Cytoplasmic	1	298	0.95
Transmembrane Helix	299	321	0.95
Cytoplasmic	322	356	0.97