YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2738919
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRRLARGCW SAFWDYETPK VIVVRNRRLG FVHRMVQLLI LLYFVWSLQG CLRSRHRPVP  60
   61 QVRLHRAEKL PGQRDRTGEL HHHQSQGDHH VGRQSVGRGG IRKAPGGGQC SQHHHQDRGY 120
  121 PFPDLGNMPR EHEGSQLYLP FRRRLYCRTA GHARQWDSHR ALCTLLPWGL QDLRGVSLVP 180
  181 GGGWNF

Type	Start	End	Confidence
Cytoplasmic	1	29	0.80
Transmembrane Helix	30	50	0.77
Non-Cytoplasmic	51	186	0.92