YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7542514, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPTASLLLP APPFVSISDV RRLQLPPRGG HRPRPCWKGL ECGSVQTRMV SSFVGSRTRR  60
   61 RNVICASLFG VGAPEALVIG VVALLVFGPK GLAEVARNLG KTLRAFQPTI REIQDVSREF 120
  121 RSTLEREIGI DEVSQSTNYT PTTMNNNQQP AADSNIKPAP APYTSDELVK VTEEQIAASA 180
  181 AAAWNPQQPA SSQQQEVYTT PSEDAPTSGG SDGPAAPALA ASDSDPKQVN LDKAETQR

Type	Start	End	Confidence
Cytoplasmic	1	63	0.56
Transmembrane Helix	64	87	0.56
Non-Cytoplasmic	88	238	0.96