YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2689078\|gb\|AA...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVLKWLFFT ISPCDAAEPW QLGFQDAATP IMQGIIDLHH DIFFFLILIL VFVLWILVRA  60
   61 LWHFHYKENA IPQRIVHGTT IEILWTIFPS LILMFIAIPS FALLYSMDEV VVDPAITIKA 120
  121 IGHQWYWTYE YSDYNSSDEQ SLTFDSYMIP EEDLELGQLR LLEVDNRVVV PAKTHLRIIV 180
  181 TSADVLHSWA VPSLGVKCDA VPGRLNQISI LVQREGVYYG QCSEICGTNH AFMPIVVEAV 240
  241 SRKDYGSWVS NQLIPQTGEA

Type	Start	End	Confidence
Non-Cytoplasmic	1	41	0.59
Transmembrane Helix	42	63	0.93
Cytoplasmic	64	82	0.62
Transmembrane Helix	83	105	0.86
Non-Cytoplasmic	106	260	0.70