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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PGPS1_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRALAPIV QPQRLFAALM VIGGGGRSAT TTTTTTTKAC GNGSSQSPPS TPLLSSKSST  60
   61 ITSNKKSAIP SSHLYIPKKS TLDSRQIGNY SREYSTSSSS SSKKSIFNDT YLNDLFWQLS 120
  121 SQGPAFEVNP NNIDFIQEPI DFYNHLIDGV KRSKKRITMA SLYLGTSKQE IELVKEMKLA 180
  181 MERNKELKIH ILLDGLRGTR IGLDKESSAT ILGELLSLYS DRVTISMYHT PDLNGILKKV 240
  241 LPPRINETIG VQHIKTYIFD DDLLLSGANL SKDYFTNRQD RYVLIRSTST VSNYFNEIVE 300
  301 IIGSLSLHVD KDNRNQLLLS SGSIDPVTQS NEFKNLAYTK LSTLLKSHSY YPSNSNSNSS 360
  361 VDSPFDCNNI NNGETTWIFP TIQMGPFNIR QDEVVTSHIF ESVPNDSKFF ITSPYFNLTE 420
  421 NYLNLILTGK PKLDIITCSP QANGFYGSKG LSSAVPDCYA IIEKRFLQRV QDTDNGDRIS 480
  481 VQEYIRDKWT YHAKGLWIQV KNQQHPSITL IGSPNFGSRS VEKDLEAQII LITQNKQLQQ 540
  541 KMENEKNYLW TDTQNANLEL FEKRKVSLMV RFLVYIFGNY L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle