YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111226804, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYSCIPINN DVREYKISRK DRSLITYFDL FLLFTFICTF VKHQFYSQSL FKSFSTYFLF  60
   61 ALILFRFYLK FFIVKEESLI VMREIGVQLK RKYFLRPSTV VEFIEKSKIE QIVINEGITK 120
  121 HNVIFYMAFI VEGKNKMVLA FEELIPRIDT LLKIYKGTQS LIFNNPTTTT TNTTATTTTN 180
  181 TTPSISSPTN QTPNNITTPT LTQVNQNNNN NNNNNNSFHT STTMSSAIDD SEDFNLK

Type	Start	End	Confidence
Cytoplasmic	1	23	0.97
Transmembrane Helix	24	46	0.89
Non-Cytoplasmic	47	53	0.80
Transmembrane Helix	54	74	0.85
Cytoplasmic	75	237	0.94