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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1209703
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKPGVLTD WPWTPLGSFK YIVIAPWAVH STYRFVTDDP EKRDLGYFLV FPFLLFRILH  60
   61 NQVWISLSRY YTSSGKRRIV DKGIDFNQVD RETNWDDQIL FNGVLFYIGI NLLAEGKQLP 120
  121 WWRTDGVLMG ALIHTGPVEF LYYWVHKALH HHFLYSRYHS HHHSSIVTEP ITSVIHPFAE 180
  181 HIAYFILFAI PLLTTLVTKT ASIISFAGYI IYIDFMNNMG HCNFELIPKR LFHLFPPLKF 240
  241 LCYTPSYHSL HHTQFRTNYS LFMPLYDYIY GTMDESTDTL YEKTLERGDD RVDVVHLTHL 300
  301 TTPESIYHLR IGLPSFASYP FAYRWFMRLL WPFTSLSMIF TLFYARLFVA ERNSFNKLNL 360
  361 QSWVIPRYNL QYLLKWRKEA INNMIEKAIL EADKKGVKVL SLGLMNQGEE LNRNGEVYIH 420
  421 NHPDMKVRLV DGSRLAAAVV INSVPKATTS VVMTGNLTKV AYTIASALCQ RGVQVSTLRL 480
  481 DEYEKIRSCV PQECRDHLVY LTSEALSSNK VWLVGEGTTR EEQEKATKGT LFIPFSQFPL 540
  541 KQLRSDCIYH TTPALIVPKS LVNVHSCENW LPRKAMSATR VAGILHALEG WETHECGTSL 600
  601 LLSDLDKVWE ACLSHGFQPL LLPHH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle