YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2642592
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPEYGRLSRK YIYSLYWSTL TLTTIGETPP PVKDEEYLFV VIDFLVGVLI FATIVGNVGS  60
   61 MISNMNASRA EFQAKIDSIK QYMQFRKVTK DLETRVIRWF DYLWANRKTV DEKEVLKNLP 120
  121 DKLKAEIAIN VHLDTLKKVR IFQDCEAGLL VELVLKLRPA VFSPGDYICK KGDIGREMYI 180
  181 IKEGKLAVVA DDGVTQFVVL SDGSYFGEIS ILNIKGSKSG NRRTANIRSI GYSDLFCLSK 240
  241 DDLMETLTEY PE

Type	Start	End	Confidence
Cytoplasmic	1	11	0.79
Transmembrane Helix	12	30	0.70
Non-Cytoplasmic	31	38	0.76
Transmembrane Helix	39	60	0.88
Cytoplasmic	61	252	0.85