YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2613147
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNSSVCSPN ATFCEGDSCL VTESNFNAIL STVMSTVLTI LLAMVMFSMG CNVEINKFLG  60
   61 HIKRPWGIFV GFLCQFGIMP LTGFILSVAS GILPVQAVVV LIMGCCPGGT GSNILAYWID 120
  121 GDMDL

Type	Start	End	Confidence
Non-Cytoplasmic	1	27	0.80
Transmembrane Helix	28	51	0.84
Cytoplasmic	52	65	0.70
Transmembrane Helix	66	89	0.89
Non-Cytoplasmic	90	96	0.59
Transmembrane Helix	97	119	0.90
Cytoplasmic	120	125	0.77