YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2316088
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPLFQQTHK QVHEIQSCMG RLETADKQSV HIVENEIQAS IDQIFSRLER LEILSSKEPP  60
   61 NKRQNARLRV DQLKYDVQHL QTALRNFQHR RHAREQQERQ REELLCRTFT TNGSDTTIPM 120
  121 DESLQFNSSL QKVHNGMDDL ILDGHNILDG LRTQRLTLKG TQKKIPDIAN MLGLSNTVMR 180
  181 LIEKRAFQDK YFMIGGMLLT CVVMFLVVQY LT

Type	Start	End	Confidence
Cytoplasmic	1	189	0.93
Transmembrane Helix	190	211	0.90
Non-Cytoplasmic	212	212	0.95