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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60473292, gi|...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQARVWILV FISLIIMTMI VFLLPNFAQS INGVQQPTVY HTPKPTISPT PTQTQTHTPT  60
   61 QTQTQTPTQT PTQTPTQTPT QTPTQTPTQT QTPSKFSVGE LDFETERNFK HDMVKFPWED 120
  121 FKAAARTGKT ENTDKYSQML ILTLAKYLIE PPLVPINESC KPEPLPTPSD DVCGKYPEVF 180
  181 SGKRDKPVKI AHMVQIGFDI DVLEVHLNEL YDIVDHFFIL ESTVTHYHRM KKPLIWEHVK 240
  241 FQDRFIKFQD KVVHLVLDDT DEENGKDLFA AEGYQETRRW QKFLDWNKRT NLYSDNDVIG 300
  301 FGDTDEISAR INLHYLKNCQ IRDGINAIDI GIWFPYGPID QVFNPDFPVR GHSYTLGDPT 360
  361 YYTIKGAIQN GKPSRNRGKS GYYMLGGMHM THYGYLPFQM VKYLSCTECG ITREDQITLF 420
  421 SSDIGKGNIQ ELESRLLETK SDHANRISKL SNMDDFFKKE VAILPWFYNC NRNRYPVWER 480
  481 KNDPRLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle