YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6851258
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFLVLCLAL SLGGTGAVPP IQSRIVGGWD CKQHSQPWQA ALYHYSTFQC GGVLVHPQWV  60
   61 LTAAHCISDH YQLWLGRHDL FENEDTAQFV FVSKSFPHPD FNMSLLKNHT RLPGEDYSHD 120
  121 LMLLQLKQPV QITDAVKVVE LPTEGIEVGS TCLASGWGSI KPEKFSFPDI LQCVDLKILP 180
  181 NDECDKAHAQ KVTEFMLCAG PLKDGQDTCV GDSGGPLTCD GVLQGIISWG YIPCGSPNKP 240
  241 SVFVRVLSYV KWIKDTIADN S

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	261	0.99