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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12060546
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRARRSRIS LVFAVIFVLL IFHFSRLAVT ISLQSWVPPP PVDHHNPPFP DQNLKDPYEN  60
   61 DNSATGSGAP PPALVEPEEY QRPPLYTDSD DSPTPSKERL DTPSNVPSQE PEFDAARLQT 120
  121 GAQTQNKHED DEDIVPISHW KPMPERHPVS PEALIKLPTG QSKELPQLQA KFKDESSSDK 180
  181 MQRLQQLDTI KSAFLHAWNG YKISAMGHDE VRPLRGGFKD TFNGWGATLV DALDTLWIMD 240
  241 LKEEFSMAVD YVKKIDFTTS TKKEIPVFET TIRYLGGMLG AYDISGHKYD ILLEKSVELA 300
  301 DVLMDAFDTP NRMPTLYYKW SPEYASEFRR GDFKAVLAEL GSLSLEFTRL AQLTKQDKYY 360
  361 DAIARITNEL EKYQDLTKLP GLWPLNLDAS GCRRVPGVSR EPAAAGQPVR WSSDEINSTS 420
  421 SVSYRTRQIH EGGEPVRHDN DSFETGFPVS VDTRTPPPKQ DCTGGLNDQL SGIDKFGLGA 480
  481 LGDSTYEYLP KEYMLLGGNN DQYLNMYQKA MDTVREYLVY QPMLKNNRDV RFLATVSMTK 540
  541 SLDAKPPGRT TFAYEGTHLT CFAGGMLAIG AKLFGLDKDL KLGSQLTDGC VWAYEATKSG 600
  601 IMPEAFQLVP CKKGEPCEWD EDAYYMAMDP YADKRPISHN KRSAGPEKGN WHVVATAESS 660
  661 SPQEDKTQKS TTTEGRHTGT TTGAGALSHE EFVTGKILND RLPPGMTGIS ARQYLLRPEA 720
  721 IESVFIMFRL TGDPSWREKG WKMFQAVDKA TKTELANSAI SDVTVDNPRP VDSMESFWLA 780
  781 ETLKYFYLLF SDPSLVSLDE YVLNTEAHPF KRPKY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle