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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2191152, gi|7...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELTSFQKSP SSNDVVSFSV SLVRNSMARR RRSSAAESLK RRNDGYESLC QVVQQDSDRR  60
   61 LITIFVIFFI VIPAVSIAVY KVKFADRVIQ TESSIRQKGI VKTDINFQEI LTEHSKASEN 120
  121 STRHYDYPVL AYITPCQGSG LVLEGRHNAD KGWIQELRSR GNALSASKGL PKLYNSCIFH 180
  181 ALKRMNFFTL ELVNFNTYLV IMFALNSREM EYNGIVLESW SRWAAYGVLH DPDLRKMALK 240
  241 FVKQLGDALH STSSPRNNQQ HMQFMYVVGP PRSEKLQMYD FGPEDLQFLK DSVDGFSLMT 300
  301 YDFSNPQNPG PNAPVKWIDL TLKLLLGSSN NIDSNIARKV LLGINFYGND FVISGGGGGA 360
  361 ITGRDYLALL QKHKPTFRWD KESGEHLFMY RDDKNIKHAV FYPTLMSILL RLENARLWGI 420
  421 GISIWEIGQD KGHFGKYAEA SLEASSIFSG HTFDMQFRTN PRQLSRNGSM LLSLTLFFHF 480
  481 FFIIFNRWEK FDDTEWTILG VEGESERERV MEALKTATFS PMSVLSEKRS EPRKPFSLPN 540
  541 LFPPKSQRPI SQESFLKRFN GGLALLTSVL SSATAPAKSL TYEEALQQSM TTSSSFDSDG 600
  601 LIEGISNFVT DNPLVIAGGV AALAVPFVLS QVLNKKPKSW GVESAKNAYT KLGTDDNAQL 660
  661 LDIRATADFR QVGSPNIKGL GKKAVSTVYN GEDKPGFLKK LSLKFKDPEN TTLYILDKFD 720
  721 GNSELVAELV ALNGFKSAYA IKDGAEGPRG WLNSSLPWIE PKKTLSLDLS SLTDSISGVF 780
  781 GESSDGVSVA LGVAAAAGLS VFAFTEDRKQ TLKQVDEFLN TKVAPKELVD ELKEIGKALL 840
  841 PQSTSNKALP APATVTAEAE SATATTTTVD KPVPEPETVA ATTTTVDKPV PEPEPVPEPV 900
  901 PVPAIEAAVA AQVITEPTET EAKPKPHSRP LSPYASVMFL LSHKEALLVG NKETFKLFII 960
  961 IIWTSVDP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle