YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SULP2_CHLRE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTTLLQPA LGLPSRVGPR SPLSLPKIPR VCTHTSAPST SKYCDSSSVI ESTLGRQTSV  60
   61 AGRPWLAPRP APQQSRGDLL VSKSGAAGGM GAHGGGLGEP VDNWIKKLLV GVAAAYIGLV 120
  121 VLVPFLNVFV QAFAKGIIPF LEHCADPDFL HALKMTLMLA FVTVPLNTVF GTVAAINLTR 180
  181 NEFPGKVFLM SLLDLPFSIS PVVTGLMLTL LYGRTGWFAA LLRETGINVV FAFTGMALAT 240
  241 MFVTLPFVVR ELIPILENMD LSQEEAARTL GANDWQVFWN VTLPNIRWGL LYGVILCNAR 300
  301 AMGEFGAVSV ISGNIIGRTQ TLTLFVESAY KEYNTEAAFA AAVLLSALAL GTLWIKDKVE 360
  361 EAAAAESRK

Type	Start	End	Confidence
Cytoplasmic	1	107	0.90
Transmembrane Helix	108	133	0.82
Non-Cytoplasmic	134	154	0.69
Transmembrane Helix	155	178	0.87
Cytoplasmic	179	187	0.67
Transmembrane Helix	188	212	0.81
Non-Cytoplasmic	213	226	0.63
Transmembrane Helix	227	249	0.90
Cytoplasmic	250	287	0.71
Transmembrane Helix	288	316	0.58
Non-Cytoplasmic	317	336	0.74
Transmembrane Helix	337	355	0.87
Cytoplasmic	356	369	0.88