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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1778500
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMTTMPDSC NSWQKCRNKT MNKKIHSLAL LVNLGIYGVA QAQEPTDTPV SHDDTIVVTA  60
   61 AEQNLQAPGV STITADEIRK NPVARDVSKI IRTMPGVNLT GNSTSGQRGN NRQIDIRGMG 120
  121 PENTLILIDG KPVSSRNSVR QGWRGERDTR GDTSWVPPEM IERIEVLRGP AAARYGNGAA 180
  181 GGVVNIITKK GSGEWHGSWD AYFNAPEHKE EGATKRTNFS LTGPLGDEFS FRLYGNLDKT 240
  241 QADAWDINQG HQSARAGTYA TTLPAGREGV INKDINGVVR WDFAPLQSLE LEAGYSRQGN 300
  301 LYAGDTQNTN SDSYTRSKYG DETNRLYRQN YALTWNGGWD NGVTTSNWVQ YEHTRNSRIP 360
  361 EGLAGGTEGK FNEKATQDFV DIDLDDVMLH SEVNLPIDFL VNQTLTLGTE WNQQRMKDLS 420
  421 SNTQALTGTN TGGAIDGVST TDRSPYSKAE IFSLFAENNM ELTDSTIVTP GLRFDHHSIV 480
  481 GNNWSPALNI SQGLGDDFTL KMGIARAYKA PSLYQTNPNY ILYSKGQGCY ASAGGCYLQG 540
  541 NDDLKAETSI NKEIGLEFKR DGWLAGVTWF RNDYRNKIEA GYVAVGQNAV GTDLYQWDNV 600
  601 PKAVVEGLEG SLNVPVSETV MWTNNITYML KSENKTTGDR LSIIPEYTLN STLSWQARED 660
  661 LSMQTTFTWY GKQQPKKYNY KGQPAVGPET KEISPYSIVG LSATWDVTKN VSLTGGVDNL 720
  721 FDKRLWRAGN AQTTGDLAGA NYIAGAGAYT YNEPGRTWYM SVNTHF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle