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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GRLA_DICDI
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.67
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLKFLIIL FITFLFNLKY INSLKQCKIS VLLSGDWSDM GYNYQMNNAR IKAESALNLE  60
   61 MSLCYKNLEV SIDLAKQAIE DSIKKGANFI VISSSVHTSI GYEYARLHRD KDIYWLIRGR 120
  121 GRPVPDDLPK VAVINFNTHL LHYTLGLVSG YLTTSGTVGF ISPGPQILAL ANSNSFYLGA 180
  181 LASRKNVTFL NAYTGSWYNP EVAYKASQML ISNGADFIGM SQDDMSVQKA LMDSGKMALG 240
  241 ITGFSNRLIW GSDIALSYIT DWSDVFIKYA GHILNDTWPE YTDYYTTLAE GGSLLFDTFS 300
  301 YRVPSEVQKL VSLEIEKLKN SSYQPFRCNP MYSQINLNFD SNGCANDMEF KNTKLLLKGT 360
  361 DISKTINLGL YTIPIEFVDY SNSMKLGLTI VSGFCILFCI ISMVLVIMFR HAKIIKSASP 420
  421 IFCLLILFGC IIIFSGCIIF SLSPTDGICG ARVWLLSIGY TIFLGSLLVK NWRIWLLFDN 480
  481 PKLKKRSITN WKLYPFVAGI LAADVLILAL WQGLGDIRSE SRIGIDSLTK YQYANVCSSN 540
  541 DQGSVALYIL LVFHGIKLLA ACFISFKIKA VDIEEFNESK PIASSIYIIT FCLFIVIPLM 600
  601 VSPQSVASQV ITIVVCAIVT TLISISLLFG SKFYMMATQG LALNQTFATN TKSSSFSLSL 660
  661 EKQKSKSNGL EFEDSDESEE KLPQIKNYSN SEIPNLQHNH SRLAHFSSDS CTSAEQDSKL 720
  721 DLENQNDENE IENNQNNQNN IVEDCQKVEK LEKDENLEKD ENLEKDENLE KDNENQSIIQ 780
  781 KKRLSKNFNQ SEIDPDDV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle