YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119187515, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLPRKALL AITSAHPPFW PDGKRTGLFF SEALHPFNEL TAAGFEVDVA SETGTFGWDE  60
   61 HSLTQEYLSK EDEKVLHSEH NHFMEKMNKQ VFKAGDLAPH DYGLMFVCGG HGALYDFPHA 120
  121 KHLQNIAQDI YKRGGVIGAV CHGPAMLPGI HDENGDSVIK DKTVTGFTTK GEIMIKVIDK 180
  181 MREDHLHTIA DMAQTANAEY VPPEDPWDDF CKVDGRIVTG ANPQSATNTA RDTIKVYEGI 240
  241 VNE

Type	Start	End	Confidence
Signal Peptide	1	21	0.75
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	243	0.99