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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11935116
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESCDCIDTP CPGEELLVKY QYISDVLIAL AYFSIPLELI YFVQKSAFFP YRWVLMQFGA  60
   61 FIVLCGATHF INLWTFSMHS KAVAVVMTIA KVACAAVSCV TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAEELD REMGLILTQE ETGRHVRMLT HEIRSTIDRH TILKTTLVEL GRTLGLEECA 180
  181 LWMPSRSGLN MQLSHTLNYH IQVGSTLPTN LPIVNEVFNN ARAMRIPYTC PLARIRPLVG 240
  241 RYVPPEVVAV RVPLLHLSNF QINDWPDHSA KSYAIMVLIL PTDSARKWRD HELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR DQLMEQNVAL NLARQEAEMA IHARNDFLAV MNHEMRTPMH 360
  361 AIIALSSLLL ETELTPEQRV MIETVLKSSN LLATLINDVL DLSRLEDGSL KLDSETFNLQ 420
  421 GIFREVINLI KPITSVKKLS MTLIMAPDLP ACAVGDEKRL MQAILNVVGN AVKFTKEGYV 480
  481 TIVASVAKPD ASRDWPECYP VSSEGHFHLC VQVKDSGCGI HPQDIPHLFT KFAQPRSGSS 540
  541 RKNGSAGLGL AICKRFVNLM GGHIWIESEG ADKGCTATFI VKLGICNSPT DPSERKVGTK 600
  601 GQTTHGSGDL TRHKPLYRDN NGSTSSNPRY QRSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle