YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4730815, gi\|7...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLALAVCVL GLIANKAESG FAVEHEMSEK VHPADASIQG LPVEEVHESF HQPANFLQIF  60
   61 QDYLEWLTSD ETDEEFPIAT NEHHLVQPDE ISEQKRLRQS QFVGARGKKA AGMGFFGARG 120
  121 KKAAPSGFFG ARGKKSFSEE LDEEFDMPKK PRAAYSGFFG ARGKKAPSMG FFGARGKKAP 180
  181 HMRFYGSRGK KAPKMGFFGA RGKKDPTEQS IGVNKDFHEV QNLDVDSAVK FLHSLSQFVD 240
  241 QGQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	243	0.99