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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11496163
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKRKALQLA VSVGMPAMSG AVYANGSDMT NPDSGVVVGY WHTWCDGGGY QGGNAPCVTL  60
   61 DEVNPMYNIV NVSFMKVYDV DDGRIPTFKL DPTIGLSEEQ FIDQISELNK QGRSVLIALG 120
  121 GADAHVELET GDERAFADEI IRLTERYGFD GLDIDLEQAA VTAANNQTVI PDALKLVKDH 180
  181 YRAEGKNFLI TMAPEFPYLT TGGKYVPYID NLEGYYDWIN PQFYNQGGDG IWVDGVGWIA 240
  241 QNNDALKEEF IYYYSDSLIN GTRGFHKIPH DQLVFGIPSS IAPAATGFVQ DPQDLYDAFE 300
  301 TLTTQGQPLR GVMTWSINWD MGTNKNGQQY NEQFIKDYGP FVHGQVTPPP VEGEPVLKGI 360
  361 ENTRVLHGTS FDPMEGVTAT DKEDGDLTSS IDVEGYVETA VIGTYVLTYR VKDSDNNETT 420
  421 KARTVEVYSQ KPVFDGVSDT TVILGTTFDP MAGVTANDVE DGDLTSTITH TGSVDVNEIG 480
  481 NYTLVYSVTD SANQTVTAER KVSVTDGSNC AAAWDVDTVY VEGDQVSHDG STWGAGWYTR 540
  541 GEEPGTTGEW GVWRKVSDSS CGGNPDPGDD LELAVSGLQS EYAPDNGNVR LDLTLTSNEA 600
  601 MDVTVKALNS AGSVVEQTKV SLTDSRSITM DLHDVAEGQY SLEVVGTATD GEIVMVNNSF 660
  661 TVKDGDGTTP PPGDYPPYEA GTNYAAGDIV VGSDNGLYEC KPWPYTAWCA SASYAPADSQ 720
  721 YWQDAWTKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle