YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11493967
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNRKNSYSI RKLSVGASSI IVASMLFVGA ESAQAAETES QDQTTVQNVK ETTESSNSNQ  60
   61 TQQQPSEPTK AKDSDTNNTN VERPESNSTQ TSNQDTDKMQ DTSTNQTNEN SKHIIDKTND 120
  121 VSHETTKTND TDQTSSQDNS EQSLEVDSNE APASNDKSTP TKQEPTNSKQ DIDETSKPNE 180
  181 DSKLVPSKSN ITSKADKQEQ SSKEPVEDNA QKDKHVSQED SSLEKQGTQE VPQTDTHKDV 240
  241 NVTPSKSSSE QQLSTTQHIT AKDSSASQEV PVHSLDSSKQ DHTTSTESHI NLDNLDKQAT 300
  301 KDRTPTDNGD DQSKDGLNTL TKNAVAIYNN KSKAQATQPT KDQTNKVAPQ QQYKNHDPII 360
  361 LVHGFNGFTA DNGPGLGDSN YWGGERLNIT QEARAKGYNV SEASVSALGS NYDRAVELYY 420
  421 YIKGGTVDYG AAHAAKYGHE RYGKSYAGAY RDWKPGQKIH LIGHSMGGQT VRLLEEMLRN 480
  481 GNPEEIEYQK QHGGEISPLY KGGQDNMISS ITTLASPHNG THASDLLGNE AIVRQAVYDF 540
  541 AKSQGNKFSR ADLGLTQWGL KQRPDETYID YVKRVENSNL WKTKDNGFYD LTTEGAQELN 600
  601 NHTSLNPNIV YKTYTGESSD PDKKGIHHRN SHMNIKYLPT TNVIGKLDDQ AWRENDGLVS 660
  661 VVSAQHPSNQ KYVDATDQIQ KGVWQVTPVQ HDWDHGDFVG TQKDENGISI EQFQGFWDNL 720
  721 LNDAIRNEKV TD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle