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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157186
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFSLLPLL ALLVVQVAGQ SEVTSDDPAT DAGSTTNSTT DTKPRIPSQD EILGQMPSIN  60
   61 PIRTGNPQMD AFYMMFPALG SLLKWGSLFP AYSILGAIPD NLQPTAAASK VVLVLADDAT 120
  121 AKTRVARQNP PPNPLGQLMN WPALPQDFQL PSMDLGPQVG SFLAQLPAMP TVPGLLGAAA 180
  181 PVPAPAPAPA AAPPPAPAPA ADPPAAPVPD APQPAILGEA ALQNAFTFFN PANFDASSLL 240
  241 GQSVPTFAPP NLDFVAQMQR QFFPGMTPAQ PAAAGTDAQA SDISEVRVRP EDPYSQEAQM 300
  301 KIKSALEMEQ ERQQQAQVKD QEQVPLLWFR MPTTQNQDAT EEKTLEHLRV EAKLRAFERQ 360
  361 VIAELRMLQK IELMAKQMRS STAAQNGDSP YRISYPLSRT PIHKITRADI EQALRDDYVR 420
  421 RLVNKEAQRR ARNSGINTQK ANALKRQAKS QDQTLSKEDI VQIMAYAYRM ANEQMESEKG 480
  481 KQDKVYAAYR TEQNPMMMQQ RQWSEEQAKI QQNQQQIQQN PMMMQQRQWS EEQAKIQQNQ 540
  541 QQIQQNPMMM QQRQWSEEQA KIQQNQQQIQ QNPMMMQQRQ WSEEQAKIQQ NQQQIQQNPM 600
  601 MVQQRQWSEE QAKIQQNQQQ IQQNPMMMQQ RQWSEEQAKI QHDQQMAQQM AQQGLMMTEQ 660
  661 RQRQWSEDQA KIQQAQQMAQ QTPMMMPQMQ QRQWTEDPQM VQQMQQRQWA EDQTRMQMAQ 720
  721 QNPMMQQQRQ MAENPQMMQQ RQWSEEQTKI EQAQQMAQQN QMMMQQMQQR QWSEDQAQIQ 780
  781 QQQRQMMQQT PMMMKERQWA EENPQSVQQQ GPMMMQQQMP SMMQREVEDE DNKAEDDLVG 840
  841 EAGPQMAGER RHRQAQSRCP GSWRQQAQEV QVQVGAATVI NYYYAAPSVR WFRVTEQATA 900
  901 EGGYGSNAYG VPRPVNSYQS QGYRAAVGND EVDEMLRQHQ TMARTINPKQ PGEVGGSESQ 960
  961 KSNSNPPTTL TPAPQEQPQE HRVHKRLAHF HRFGQEAGLN ATTSKGCGCG RLDCLCGRSC1020
 1021 RCGRRGLESR VVSSRTSGTC QCKASHRNKR CEYGTLETID EGSLNELRRE YKLGLKEITL1080
 1081 SPDEDPAEAL MRYNAASIRE ALERASMEPL EIGGDQYEED AQQEPMEEEQ LQHDPNTEPQ1140
 1141 YNHKDFVRLT TSTASPITST TEAATPTGSD STSEATVTPE VTTTTSTSTT TTTESTKDEG1200
 1201 LDMQQDSQAE AESSHVTKSI SKQEAXIHQL HSIVEELKNE ILKLNLRCST IISNNVAKEP1260
 1261 VTEKNPPVVE EPSKQEDKPK VEEKVIAEEQ APVEPEEDLE EDEDSTSIST TTETPSPSGS1320
 1321 YSTKPGLSLG SPRVDEQSGS SNKLDYDDDN NWQRILANRG YDTDYLTKSH ERQFAQGQNL1380
 1381 EMPKNCNYDG NGSQEYGPYP EFQADEPSTD TEGKAKRALS VKQQAQLLNA ALNDSGSDSS1440
 1441 DGTTTTTTPS PYAMRGKFVR RRSTARRVPI PKIGKASDEV WVRSPRQAKM PQRPKKSMSK1500
 1501 PKKQSSQVTT QATVSSTKLD SLVDVLKDLV RLQIQKEKKS SLLRTQSNNL SKTKPKSIKP1560
 1561 VKVIKRKRLR RRQHKSIATT IRSPIQTKA

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